We have hosted the application vdjfasta to run in windows online over linux online in order to run this application in our online workstations with Wine or directly.
Quick description about vdjfasta to run in windows online over linux online:
Bioinformatics Perl extension for the analysis of antibody variable domain repertoires. Suitable for mammalian repertoire sequences obtained either by Sanger or 454 sequencing. Methods published in Glanville, Zhai, Berka et al, PNAS 2009.Features:
- HMM-based CDR identification
- HMM-based translation and alignment
- Probabilistic germline classification
Audience: Science/Research.
User interface: Console/Terminal.
Programming Language: Perl.
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