We have hosted the application tuque to run in linux online in order to run this application in our online workstations with Wine or directly.


Quick description about tuque to run in linux online:

Tuque includes 4 programs:
tuqueIndex to prepare Bowtie indexes that include spliced sequences
tuqueMap to map reads using the prepared indices
tuqueSplice to find splice junctions from the reads
tuqueCount to count the reads mapping within annotated sequence intervals

Audience: Science/Research, Advanced End Users.

Programming Language: Python.

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