splicegrapher

We have hosted the application splicegrapher in order to run this application in our online workstations with Wine or directly.

Quick description about splicegrapher:

SpliceGrapher predicts alternative splicing patterns and produces splice graphs that capture in a single structure the ways a gene's exons may be assembled. It enhances gene models using evidence from next-generation sequencing and EST alignments.

Features:

• splice graph prediction
• splice junction prediction using support-vector machines
• splice graph visualization

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