soapdenovo2 online with Winfy

We have hosted the application soapdenovo2 in order to run this application in our online workstations with Wine or directly.


Quick description about soapdenovo2:

What's next of SOAPdenovo2:
MEGAHIT is the formal successor of SOAPdenovo2
MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
http: //www.ncbi.nlm.nih.gov/pubmed/25609793
https: //github.com/voutcn/megahit

Latest Code on GitHub:
https: //github.com/aquaskyline/SOAPdenovo2

SOAPdenovo is a novel short-read assembly method that can build a de novo draft assembly for human-sized genomes. The program is specially designed to assemble Illumina short reads. It creates new opportunities for building reference sequences and carrying out accurate analyses of unexplored genomes in a cost effective way. SOAPdenovo2 is the successor of SOAPdenovo. Cite the paper published in GigaScience (see website below) if you want to cite SOAPdenovo2.

Audience: Science/Research, Developers.
User interface: Command-line.
Programming Language: C++, C.
Database Environment: Flat-file.
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