We have hosted the application skewer in order to run this application in our online workstations with Wine or directly.
Quick description about skewer:
This program implements a novel dynamic programming algorithm dedicated to the task of adapter trimming and it is specially designed for processing illumina paired-end sequences.Features:
- Detection and removal of adapter sequences
- Insertion and deletion allowed in pattern matching
- Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads
- Demultiplexing of barcoded sequencing runs
- Multi-threading support
- Trimming based on phred quality scores
- IUPAC characters for barcodes and adapters
- Compressed input and output support
Audience: Science/Research.
Programming Language: C++.
Categories:
©2024. Winfy. All Rights Reserved.
By OD Group OU – Registry code: 1609791 -VAT number: EE102345621.