skewer online with Winfy

We have hosted the application skewer in order to run this application in our online workstations with Wine or directly.

Quick description about skewer:

This program implements a novel dynamic programming algorithm dedicated to the task of adapter trimming and it is specially designed for processing illumina paired-end sequences.

  • Detection and removal of adapter sequences
  • Insertion and deletion allowed in pattern matching
  • Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads
  • Demultiplexing of barcoded sequencing runs
  • Multi-threading support
  • Trimming based on phred quality scores
  • IUPAC characters for barcodes and adapters
  • Compressed input and output support

Audience: Science/Research.

Programming Language: C++.

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By OD Group OU – Registry code: 1609791 -VAT number: EE102345621.