scfvminer

We have hosted the application scfvminer in order to run this application in our online workstations with Wine or directly.

Quick description about scfvminer:

These scripts written in java can be used for deep sequencing analysis of the scFv antibodies from a synthetic antibody library and yields complete sequence information on the randomized areas of antibodies enriched from the library by phage display. The methods are descriped in L�vgen, J., Pursiheimo, J.P., Pyykk�, M., Salmi, J. & Lamminm�ki, U. (2016) Next generation sequencing of all variable loops of synthetic single framework scFv � application in anti-HDL antibody selections. New Biotechnology 33: 790-796.

Features:

• next generation sequencing
• CDR loops

Programming Language: Java.
Categories: