We have hosted the application sbetoolbox to run in windows online over linux online in order to run this application in our online workstations with Wine or directly.


Quick description about sbetoolbox to run in windows online over linux online:

SBEToolbox (Systems Biology and Evolution Toolbox) is being developed in MATLAB as a menu-driven UI software to determine various statistics of the biological network. Some of its features include (but not limited to) algorithms to create random networks (small-world, ring lattice etc.), deduce clusters in the network (MCL, mCode, clusterOne) etc.

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PROJECT MIGRATED TO GITHUB FOR FUTURE UPDATES: https: //github.com/biocoder/SBEToolbox/releases
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Reference ( In Press ):
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Konganti K, Wang G, Yang E, Cai JJ* (2013). SBEToolbox: a Matlab toolbox for biological network analysis. Evolutionary Bioinformatics, 8: 1-15

Features:
  • Create random networks (Small World, Erd�s - R�nyi, Ring Lattice)
  • Import network information in various formats such as SIF, PAJEK and TAB delimited
  • Get various statistics about the current network of interest (Degree Centrality etc.)
  • View networks using Protovis add on or using Cytoscape
  • Apply different algorithms (MCL, mCode, clusterOne) for module detection
  • Extract largest connected network


Audience: Advanced End Users, End Users/Desktop, Science/Research.
User interface: Console/Terminal, Grouping and Descriptive Categories (UI).
Programming Language: MATLAB.

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