rdp classifier to run in linux online online with Winfy

We have hosted the application rdp classifier to run in linux online in order to run this application in our online workstations with Wine or directly.


Quick description about rdp classifier to run in linux online:

The RDP Classifier is a naive Bayesian classifier that can rapidly and accurately provides taxonomic assignments from domain to genus, with confidence estimates for each assignment. More information can be found at http: //rdp.cme.msu.edu/.

Features:
  • Release 2.11 provides subcommand to display the pre-compiled taxonomy versions.
  • Release 2.10 provides gene copy number adjustment for 16S gene sequences.
  • Release 2.7 offers updated Fungal LSU training set No 11. The new Fungal LSU training set offers increased coverage of the Glomeromycota, Chytridiomycota and other basal lineages, with expanded non-fungal Eukarya phyla to better separate fungi from other eukaryotes.
  • The RDP Classifier now allows classification of both bacterial and archaeal 16S rRNA sequences, Fungal LSU and Fungal ITS sequences.
  • The RDP MultiClassifier has been merged with RDP Classifier as one single package. The new version of RDP Classifier now offers subcommands for classification, library comparing, retraining classifier, leave-one-out testing and cross validation. See instructions on https: //github.com/rdpstaff/classifier. Many more RDP open source tools and usage examples on GitHub (https: //github.com/rdpstaff).


Audience: Science/Research.
User interface: Command-line.
Programming Language: Java.

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