raxmlgui online with Winfy

We have hosted the application raxmlgui in order to run this application in our online workstations with Wine or directly.

Quick description about raxmlgui:

RELEASE NOTE: Get raxmlGUI 2.0 at the NEW PROJECT LOCATION: https: //antonellilab.github.io/raxmlGUI/

raxmlGUI is a graphical user interface to RAxML, one of the most popular and widely used software for phylogenetic inference using maximum likelihood.

A userfriendly graphical front-end for phylogenetic analyses using RAxML (Stamatakis, 2006). Please cite: Silvestro, Michalak (2012) - raxmlGUI: a graphical front-end for RAxML. Organisms Diversity and Evolution 12, 335-337. DOI: 10.1007/s13127-011-0056-0

Features:

• *NEW VERSION 2.0 NOW AVAILABLE: https: //antonellilab.github.io/raxmlGUI/*
• *version 1.5* adds the possibility to run analyses through CIPRES Science Gateway
• The GUI includes RAxML executables
• Multiplatform compatibility (Mac OS, Windows, Linux)
• Requires Python 2.6, 2.7
• Intuitive interface for data partitioning, and outgroup selection
• Model selection for DNA, amino acid, binary, and multistate alignments
• Automatic conversion NEXUS to PHYLIP (and vice versa)
• Import FASTA files
• Ancestral state reconstruction
• "Bootstopping" function (Pattengale et al. 2010)
• Interactive exclusion of sites
• Combining multiple alignments with automatic partitioning
• Interactive definition of topological constraints
• Robinson-Foulds pairwise distances
• Per-site likelihoods

Audience: Science/Research.
User interface: Tk.
Programming Language: Python.

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