rafah online with Winfy

We have hosted the application rafah in order to run this application in our online workstations with Wine or directly.

Quick description about rafah:

One fundamental question when trying to describe viruses of Bacteria and Archaea is: Which host do they infect? To tackle this issue we developed a machine-learning approach named Random Forest Assignment of Hosts (RaFAH), which outperformed other methods for virus-host prediction. Our rationale was that the machine could learn the associations between genes and hosts much more efficiently than a human, while also using the information contained in the hypothetical proteins. Random forest models were built using the Ranger? package in R?.

Features:

• Random Forest
• R
• Ranger
• Host Prediction
• perl

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