mirdp2 to run in linux online online with Winfy

We have hosted the application mirdp2 to run in linux online in order to run this application in our online workstations with Wine or directly.

Quick description about mirdp2 to run in linux online:

miRDeep-P2 (miRDP2) is developed to accurately and fast analyze microRNAs (miRNAs) transcriptome in plants. It is adopted from miRDeep-P (miRDP) with new strategies and overhauled algorithm. We have tested miRDP2 to analyze miRNA transcriptomes in such plants with gradually increased genome size as Arabidopsis, rice, tomato, maize and wheat. Compared with miRDeep-P and several other computational tools, miRDP2 processed NGS data with superior speed. By incorporating newly updated plant miRNA annotation criteria, the accuracy of miRDP2 is also markedly improved. Our results demonstrate miRDP2 as a fast and accurate tool for analyzing the miRNA transcriptome in plants.
Reference: https: //doi.org/10.1093/bioinformatics/bty972

Features:

• small RNA
• microRNA(miRNA?
• Next Generation Sequencing (NGS)
• Perl

Audience: Science/Research.

Programming Language: Perl.
Database Environment: Perl DBI/DBD.
.