mira to run in linux online

We have hosted the application mira to run in linux online in order to run this application in our online workstations with Wine or directly.

Quick description about mira to run in linux online:

MIRA - Sequence assembler and sequence mapping for whole genome shotgun and EST / RNASeq sequencing data. Can use Sanger, 454, Illumina and IonTorrent data. PacBio: CCS and error corrected data usable, uncorrected not yet.

Features:

• Allows hybrid assemblies of Sanger, 454, Solexa, IonTorrent and PacBio (CCS & ecCLR) data
• Can use paired-end and / or unpaired data
• Supports ancillary data in TRACEINFO format (from NCBI)
• Marks places of interest with tags so that these can be found quickly in finishing programs
• Has a SNP analysis pipeline for sequencing data of viruses and procaryonts

Audience: Advanced End Users, Science/Research.
User interface: Command-line.
Programming Language: C++.

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