mica aligner to run in linux online

We have hosted the application mica aligner to run in linux online in order to run this application in our online workstations with Wine or directly.

Quick description about mica aligner to run in linux online:

Latest Code in GitHub:
https: //github.com/aquaskyline/MICA-aligner

To better utilize MIC-enabled computers for NGS data analysis, we developed a new short-read aligner MICA that is optimized in view of MIC�s limitation and the extra parallelism inside each MIC core. Experiments on aligning 150bp paired-end reads show that MICA using one MIC board is ~4.85 times faster than the CPU-(multi-core)-based BWA-MEM and about the same speed as the GPU-based SOAP3-dp. Furthermore, MICA�s simplicity allows very efficient scale-up when multiple MIC boards are used in a node (3 cards gives a 14-fold speedup over 6-core BWA-MEM).

Audience: Science/Research, Education, Engineering.
User interface: Command-line.
Programming Language: C++.
Database Environment: Flat-file.
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