metaphat meta pheno association tracker online with Winfy

We have hosted the application metaphat meta pheno association tracker in order to run this application in our online workstations with Wine or directly.

Quick description about metaphat meta pheno association tracker:

MetaPhat is an active and open sourced (MIT license) tool to detect variants with multivariate associations by using summary statistics from univariate GWAS studies. The application also performs decomposition by finding optimal BIC subsets and P-value driver traits for the multivariate lead variants. Variant results are traced and clustered to assist with dissecting phenotypes-genotype relationships.

Please see our wiki home for installation instructions, required GWAS data formats and example inputs with test command - https: //

Global lipids (GLGC, Willer 2013) data/source tar example - https: //

If you run into problems or have feature requests after trying example and reading tutorial, please email: [email protected]

Copyright <2019> [email protected], [email protected]<COPYRIGHT HOLDER>

  • multivariate genome-wide trait analysis
  • p-value and BIC based optimal trait subset selection
  • trait decomposition trace plots
  • lead SNP and driver trait summary file
  • snp-snp trait rank spearman cluster


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