We have hosted the application glycosylation microviewer in order to run this application in our online workstations with Wine or directly.
Quick description about glycosylation microviewer:
Glycosylation Microviewer is an application that create N-linked glycosylation raction network. The model used in the application is based on two significant papers: 1.1997 Pablo Umana, James E.Bailey A Mathematical Model of N-linked Glycoform Biosynthesis. 2.2005 Frederick J.Krambeck, Michael J.Betenbaugh A Mathematical Model of N-linked Glycosylation.The application allow to simulate the network in dynamic form with various ODE solvers(Euler, Runge-Kutta etc). Genetic Algorithm is used to adjust the kinetic parameters of Michaelis-Menten equations in glycosylation reaction network. A dynamic plot is supplied to show the value of mole amout and mole fraction of various glycoform.
Thanks to Alexey Balakin and Alessandro Presta. Alexey Balakin supply mathgl(https: //sourceforge.net/projects/mathgl) that make the implementation of dynamic plot in this application easily. Alessandro Presta supply fga(https: //sourceforge.net/projects/fga) that provide a powerful use of GA.
Audience: Science/Research.
User interface: Win32 (MS Windows).
Programming Language: C++.
Categories:
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