genocline online with Winfy

We have hosted the application genocline in order to run this application in our online workstations with Wine or directly.

Quick description about genocline:

Identification of clines from allele frequency or genome-wide databases. Angular transformation. Sigmoid function.
Parameterization of a cline: orientation, Pearson’s product-moment correlation coefficient, linear and sigmoid regression and coefficient of determination. Graphical representation of the cline. Confidence limits.
Spatial autocorrelation. Moran's index.
Isolation by distance. Exponential regression. Correlation Fst/Distance.
Centroid method.
Cline's expected vs. predicted heterozygosity.
MDS. Sammon projection.
Geographical distances. Fst distances.
Export data to Arlequin, Phylip, Past and Poptree.
User-friendly input data.

Features:

• Identification of clines from allele frequency or genome-wide databases. Angular transformation. Sigmoid function.
• Parameterization of a cline: orientation, Pearson’s product-moment correlation coefficient, linear and sigmoid regression and coefficient of determination.
• Graphical representation of the cline. Confidence limits.
• Spatial autocorrelation. Moran's index. Isolation by distance. Exponential regression. Correlation Fst/Distance. Centroid method. Cline's expected vs. predicted heterozygosity. MDS. Sammon projection. Geographical distances. Fst distances.
• Export data to Arlequin, Phylip, Past and Poptree.
• User-friendly input data.

Audience: Science/Research, Education.
User interface: Java Swing.
Programming Language: Java.
Categories: