denovocheck

We have hosted the application denovocheck in order to run this application in our online workstations with Wine or directly.

Quick description about denovocheck:

DeNovoCheck is intended to be used for inheritance analysis in NGS tio data. For rare dominant Mendelian diseases, patient-parent trios are often used to reduce the number of candidate variants. The algorithm bases the inheritance prediction on the data available in the parental BAM files and allows for a fast and reliable selection of potential de novo variants.

Features:

• Identify de novo variants in NGS trio data
• Command line parameters
• Properties file configuration

Audience: Science/Research.
User interface: Command-line.
Programming Language: Java.
Categories: