codecz

We have hosted the application codecz in order to run this application in our online workstations with Wine or directly.

Quick description about codecz:

CoDeCZ derives copy number state from targeted sequencing data on gene or exon level.
Results are NOT true copy number however, but they are semi-quantitative:
It uses the modified z-score to calculate deviation in normalized coverage per specified region. The higher the Z-score,
the higher the copy number. The final z-score depends on the quality of the data and the makeup of the reference pool.

Programming Language: Unix Shell.
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