cape rna

We have hosted the application cape rna in order to run this application in our online workstations with Wine or directly.

Quick description about cape rna:

CAPE RNA is package of command-line tools for integrated analysis of miRNA-mRNA expression data. miRNA-mRNA interaction states are assigned for each sample independent of a priori known experimental groups. Using these interaction classifications Jaccard-indexes are calculated to evaluate the quality of a predicted interaction based on the distribution of assigned interaction states compared to experimental groups. In addition, negative correlation between miRNA and mRNA expression can be analyzed.

Audience: Science/Research.
User interface: Command-line.
Programming Language: Perl.
Categories: