biofvm

We have hosted the application biofvm in order to run this application in our online workstations with Wine or directly.

Quick description about biofvm:

BioFVM is an open source diffusive transport solver for biological problems. It can solve for the diffusion of tens or hundreds of substrates on large 3-D domains. For simplicity, the code has minimal external dependencies.

BioFVM was first published in:

A. Ghaffarizadeh, S.H. Friedman, and P. Macklin. BioFVM: an efficient, parallelized diffusive transport solver for 3-D biological simulations. Bioinformatics 32(8): 1156-8, 2016.

DOI: 10.1093/bioinformatics/btv730

method paper: http: //dx.doi.org/10.1093/bioinformatics/btv730.

Features:

• simultaneously solve diffusion of many substrates
• powerful even on desktop workstations
• OpenMP parallelization
• cross-platform
• minimal dependencies

Audience: Science/Research, Education, Developers, Engineering.

Programming Language: C++.
Categories: