We have hosted the application biocompup align in order to run this application in our online workstations with Wine or directly.


Quick description about biocompup align:

C++ library for protein sequence profile to profile alignment. Implementing numerous known alignment variants in a flexible and manageable architecture.

Features:
  • Make sequence to sequence alignment
  • Make profile to sequence alignment
  • Make profile to profile alignment
  • Use three different weighting schemes in the construction of profiles
  • Use eleven different scoring functions used in alignments against profile Profile
  • Use structural information of various kinds
  • Use of penalty functions for linear gap
  • Perform global, local and semi-global alignments


Audience: Science/Research.
User interface: Console/Terminal.
Programming Language: C++.
Categories:
Bio-Informatics

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